FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17939
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1626690.67395061040192No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACATGCGCAGAT950.5295724399353364No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG910.5072746529906907No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC760.4236579519482691No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC530.2954456770165561No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC460.25642454986342605No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCTGCTTGGCGAGG390.21740342271029603No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG380.21182897597413455No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCTGCTTGGCGAGG360.20068008250181169No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG300.16723340208484308No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTTGCGAGG300.16723340208484308No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG300.16723340208484308No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG300.16723340208484308No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC290.16165895534868163No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC290.16165895534868163No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG270.1505100618763588No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCTGCTTGGCGAGG270.1505100618763588No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC260.14493561514019734No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG260.14493561514019734No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCTGCTTGGCGAGG240.13378672166787445No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCTAGG220.1226378281955516No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC210.11706338145939016No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC210.11706338145939016No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCTGCTTGGCGAGG200.11148893472322871No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG200.11148893472322871No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC180.10034004125090584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)