FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences528
Sequences flagged as poor quality0
Sequence length51
%GC86

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG35967.99242424242425No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10820.454545454545457No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT112.083333333333333No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT30.5681818181818182No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACAATCTGACGC20.3787878787878788No Hit
GAGTACATGGGGATGTAGTATGGTATGAGAGACTGGTCCACACAGTCACTG20.3787878787878788No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.3787878787878788No Hit
TGGGGGTCGTGCCACGGGACTGGATTGGCCGTGCTCCGGGTCTTTCACCCA10.1893939393939394No Hit
ACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGA10.1893939393939394No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGG10.1893939393939394No Hit
GACTGGGAAACCCTGTCTCTTATACACATTTGACGCTGCCGACGAAGGCTT10.1893939393939394No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTA10.1893939393939394No Hit
TACTGGTAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.1893939393939394No Hit
GGCTTGTTAGGATAGTTAAGAAAGCTGCCTATTGGCTGGAGGGAGAGGCTT10.1893939393939394No Hit
GGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGTGTGGGGGGGGGGGGGG10.1893939393939394No Hit
GACTGGGAAACCTGTCTCTATACACATCTGACGCCTGCCGACGAAGGCTTA10.1893939393939394No Hit
GACTGGGAAACCCTGGCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.1893939393939394No Hit
GACTTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.1893939393939394No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.1893939393939394No Hit
GCTGGTGCAAAGGATGAGTTGCCCTTTGCTTTCTATTACTTGTGCATTTGC10.1893939393939394No Hit
GGAAACCCTGTCGCTTATACACAACTGACGCAGCCGAAGAAGGCGTAGGTG10.1893939393939394No Hit
TGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.1893939393939394No Hit
GGCGTCTCAAAAACCACAAAAAAAAAAAAAAAAAAAAAAACCACAAAACAA10.1893939393939394No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATGCTT10.1893939393939394No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT10.1893939393939394No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG10.1893939393939394No Hit
GGGGTGTGGGGCTGGGGTGGGGGTGGTTGTGGTGAGGGGGTCGCGGTTGGG10.1893939393939394No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG10.1893939393939394No Hit
GACTGGGAAACCTGTCTCTTATCACACTGACGCTGCCGACGAAGGCTTAGG10.1893939393939394No Hit
CGCTGGGGGTCTTAGGGATGGGGGGCGCCGCTTACTTGTGCTACTCAGTGA10.1893939393939394No Hit
GGTGGGGCCGTCGTGTGGTTCGGTTTTTGTTCTTGTGGGACTGGTCATTGG10.1893939393939394No Hit
GGGGGGGGGGGGGGGGGGGGTGGGGGGGCCGGGGGGGGGGGGGGGGGGGGG10.1893939393939394No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.1893939393939394No Hit
AGGGTGGCGGGCGTCGAGTGCCCCCACTGCTGCAGTGGGCGTTGGCGGGCT10.1893939393939394No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTT10.1893939393939394No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGTGGGGGGGGG10.1893939393939394No Hit
GACTGGGAAACCCTGTCTCTTATACACCATCTGACGCTGCCGACGAAGGCT10.1893939393939394No Hit
GACTGGCACGCTCCGTCTCGTTGGCTCGGAGATGTGTATAGTGGACTGGGA10.1893939393939394No Hit
GGTGACTCCTAAATACCATCCTTATAAAATACTAACTAATTCCTACTACTA10.1893939393939394No Hit
GAGCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGCTGT10.1893939393939394No Hit
GGGGGGGGGGGGGGGGGGGGGGGTTTGCAAAATAAAAGGTGAACCCAGCAA10.1893939393939394No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.1893939393939394No Hit
TATAGTGGACTGGGAAACCCCTGTCTCTTATACACATCTGACGCTGCCGAC10.1893939393939394No Hit
AGAAGGTCCAAAAAAATAACACTTACCTACCAAAATATTATACAAATTAAA10.1893939393939394No Hit
GCTCTAAGGTCACCAAAGACCCCAGAGGTGGCTAAAGCTTGACCTAAGGAG10.1893939393939394No Hit
AGGATGTCCCCATAAATAATATAAAAACCACAAAAAAAACCCTTACCCCAA10.1893939393939394No Hit
GACTGGGAAACCCTGTCTCTTAACACTCTGACGCTGCCGACGAAGGCTTAG10.1893939393939394No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGTGGGGGGT10.1893939393939394No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)