FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216065

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216065
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3446
Sequences flagged as poor quality0
Sequence length51
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT304588.3633197910621No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG932.698781195589089No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGTCAAGCGGCT290.8415554265815438No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA100.2901915264074289No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT90.261172373766686No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGTCTCGCCAAGCGGCT70.20313406848520024No Hit
GACTGGCACGCTCCATGACAGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT60.17411491584445735No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT60.17411491584445735No Hit
GACTGGCACGCTCCATGACCGGCCCAACAGTCTCTGCCTCGCCAAGCGGCT60.17411491584445735No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTTCCTCGCCAAGCGGCT60.17411491584445735No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT60.17411491584445735No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT50.14509576320371445No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT50.14509576320371445No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT50.14509576320371445No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT50.14509576320371445No Hit
GACTGGCACGCTCCATGACCTGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT40.11607661056297155No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT40.11607661056297155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)