FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20712
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1857589.68230977211279No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACATCTCAGGAT2451.1828891463885671No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1000.48281189648512934No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG780.3765932792584009No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC650.3138277327153341No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC640.3089996137504828No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC590.28485901892622634No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG450.21726535341830824No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAGG420.20278099652375434No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG420.20278099652375434No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG400.19312475859405176No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG380.18346852066434918No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC370.17864040169949788No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG370.17864040169949788No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCCGCTTGGCGAGG340.164156044804944No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCCGCTTGGCGAGG330.1593279258400927No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACATCTC330.1593279258400927No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCTAGG310.14967168791039012No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCCGCTTGGCGAGG290.14001544998068752No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG280.13518733101583622No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG280.13518733101583622No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTTGCGAGG270.13035921205098494No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC260.12553109308613364No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC240.11587485515643105No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC240.11587485515643105No Hit
GGTTTCCCAGTCCACTATACTGACGTATCCAACATGAGCCGCTTGGCGAGG210.10139049826187717No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC210.10139049826187717No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)