FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTCGCTAAT36966.01073345259391No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTCG6611.806797853309481No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG213.7567084078711988No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG71.2522361359570662No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACACTCGC61.073345259391771No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTCGCTAATC40.7155635062611807No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACACTCGCTAATCG30.5366726296958855No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTCG30.5366726296958855No Hit
GGTTTCCAAGTCCACTATACACATCTCCGAGCCCACGAGACACTCGCTAAT30.5366726296958855No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCAACGAGACACTCG20.35778175313059035No Hit
GGTTTCCCAGTCCACTATACTGCCAGTCCTGTCTCTTATACACATCTCCGA20.35778175313059035No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTCG20.35778175313059035No Hit
GGTTTCCCAGTCCTGTCTTTATACACATCTCCGAGCCCACGAGACACTCGC20.35778175313059035No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG20.35778175313059035No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCAGCCCACGAGACACTCGC20.35778175313059035No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACACTCG20.35778175313059035No Hit
GGTTTCCCAGTCCTGTCTCTTAACACATCCCGAGCCCACGAGACACTCGCT10.17889087656529518No Hit
GGTTTCCCAGTCAACTATACACATCTCCGAGCCCACGAGACACTAGCTAAT10.17889087656529518No Hit
GGTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGCA10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGACCCACGATACACTCTC10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACACTCGCTAAT10.17889087656529518No Hit
AGGCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGATCG10.17889087656529518No Hit
GTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTCGC10.17889087656529518No Hit
GGTATACAAGTCCAATATACTCACTTCTCCAACAACATCCCATAAGCAAGC10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACATCTCCGAGCCCACGAGACACTCGCTAATCT10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCAGAGCCCACGAGACACTCG10.17889087656529518No Hit
CATCTATATCAGGAATTTCAAACCCAAATTCGTCTTCCATGGCCATGATAA10.17889087656529518No Hit
CATTTCCCAGTCCACTATACTGTCACTTATACACATCTCCGAGCCCACGAG10.17889087656529518No Hit
GGTTACCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTCGCTAAT10.17889087656529518No Hit
GGTTTCCCGTCCACTATACACATCTCCGAGCCCACGAGACACTCGCTAATC10.17889087656529518No Hit
TCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTA10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCGAGCCCACGAGACACTCGC10.17889087656529518No Hit
GCTAAGCAGAGACTGTAGTAGCGGCGACAGCGACGACGGCAGCGATGGCTG10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACTGCCAGTCCTGTCTCTTATACACATCCCGAG10.17889087656529518No Hit
GGTTCCCAGTCCTGTCTATTATACACATCTCCGAGCCCACGAGACACTCGC10.17889087656529518No Hit
GGTTTCCCAGTCCACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTAT10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACACGCTAAT10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATATCCGAGCCCACGAGACAATCGCTAAT10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTTCGAGCCCACGAGACACTCG10.17889087656529518No Hit
GGTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTCGC10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGAGCCCACGAGACACTCGC10.17889087656529518No Hit
GTTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTCGCTAAT10.17889087656529518No Hit
CAAAAAAATAAATGATCGTAGATAAATAAAGTACACGCTAAGAGTAATACC10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACACTCGCTAAT10.17889087656529518No Hit
GGTTTCCCATCCATATACACATCTCCGAGCCCACGAGACACTCGCTAATCG10.17889087656529518No Hit
GNTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTCG10.17889087656529518No Hit
GGTTTCACAGTCCACTATACACATCTCCGAGCCCACGAGACACTCGCTAAT10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATCTCCTAGCCCACGAGACACTCGCTAAA10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTTATACACACTCCGAGCCCACGAGACACTCGC10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTTATACACACTCCGAGCCAACGAGACACTAGC10.17889087656529518No Hit
AGGGATAACAGCGCAATCCTATTCTAGAGTCCATATCAACAATAGGGTTTA10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACTCATCTCCGAGCCCACGAGACACTCGCTAAT10.17889087656529518No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATTCCGAGCCCACGAGACACTCGC10.17889087656529518No Hit
GGTTTCCCAGTCCTTCTCTTATACACATCTCCGAGCCCACGAGACACTCGC10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACTCTTATACACATCTCCGAGCCCACGAGACAC10.17889087656529518No Hit
GGTTTCCCAGTCACTTATACACATCTCCGAGCCCACGAGACACTCGCTAAT10.17889087656529518No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.17889087656529518No Hit
GCAGGAGAAGAGAGGAGGGCACACTTGGAACTCCCCTCCCCACAATACGTG10.17889087656529518No Hit
GGTTTGCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTCGCTAAT10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACACGCTAAG10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATCCCGAGCCCACGAGACACTCGCTAATC10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACTTATACACATCTCCGAGCCCACGAGACACTC10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGAAACTCGATAAT10.17889087656529518No Hit
GAATTAACACACCAAAATAAAAATATACCATCCAACCCAACAATCTCTAAA10.17889087656529518No Hit
GAGCGTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTC10.17889087656529518No Hit
GCTATTTAAGCTTGTGCATGCGTCGCATAGTTCTCCTGCCATGGTTTTCAG10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGACCCACGAGACACTCGC10.17889087656529518No Hit
CTCTTCCTCGGCGCTGCCTACGGAGGTGGCAGCCATCTCCTTCTCGGCATC10.17889087656529518No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATATCCGAGCCCACGAGACACTCG10.17889087656529518No Hit
GGGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATCCCCGAGCCCACGAGACACTCGCTAAT10.17889087656529518No Hit
GTATACCCAGTCCACTAAACACAACTCCGAGCAAACGAAACACTCGCTAAT10.17889087656529518No Hit
GGTTTCCCAGTCCCTATACACATCTCCGAGCCCACGAGACACTCGCTAATC10.17889087656529518No Hit
GGTTTCCCAGTCACTATACACATCTCCGAGCCCACGAGACACTCGCTAATC10.17889087656529518No Hit
GGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCCAAGTGGA10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGA10.17889087656529518No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGACCACGAGACACTCGCTAAT10.17889087656529518No Hit
GGTTGCCAGTCCTGTCTTTATACACATCTCCGAGCCCACGAGACACTCGCT10.17889087656529518No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)