FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216074

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216074
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69069
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG6275590.85841694537346No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG3170.4589613285265459No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG3030.4386917430395691No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCGGAGCCTAT2800.4053917097395358No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC2250.3257611953264127No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC2010.29101333449159533No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1670.24178719830893744No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1400.2026958548697679No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1390.20124802733498384No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1370.19835237226541574No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG1220.1766349592436549No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG1200.17373930417408678No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC1130.16360451143059837No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCCGCTTGGCGAGG1010.1462305810131897No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGTGAGG990.1433349259436216No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC980.14188709840883754No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGATG960.13899144333926944No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCCGCTTGGCGAGG910.13175230566534915No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG890.12885665059578102No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC850.1230653404566448No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC850.1230653404566448No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTTGCGAGG850.1230653404566448No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCTAGG830.1201696853870767No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC800.11582620278272453No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG780.1129305477131564No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC740.10713923757402018No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCCGCTTGGCGAGG730.10569141003923613No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGA700.10134792743488395No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)