FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216077

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216077
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences530
Sequences flagged as poor quality0
Sequence length51
%GC86

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36669.0566037735849No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA6812.830188679245284No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT356.60377358490566No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT112.0754716981132075No Hit
GACTGGGAAACCCTGTCTCTTATAACATCTGACGCTGCCGACGAATTAGAC20.37735849056603776No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGAC20.37735849056603776No Hit
GGGGGGGGGAAACCACTCTAAAAAAAAAAAAAAAAACAAACCCCCAAAAAT10.18867924528301888No Hit
GACTGGGAAACCCTGTCTATTATACACATCTGACGCTGCCGACGAATTAGA10.18867924528301888No Hit
GGAAACCCAGTCTATTAAAAACAAAATACGCTTCCCACGAAATAGACGGTT10.18867924528301888No Hit
GAATCTCACAATCCAAAACCCTCCAACAAGTATCACACTCTCAAAGATAAA10.18867924528301888No Hit
CTCCAACCCTCATATGACTGTTATACAAAAATTAAAAAAAAGACAAAATAG10.18867924528301888No Hit
TGTGGGTCCTCCCAATTTGCGAAAATTACATCCATAATCCTCTACGCCCAA10.18867924528301888No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCTACGAATTAGA10.18867924528301888No Hit
CTATGTCTGGAAGGCTGTGGTCCAAGGCCATTTTTGCTGGCTATAAGCCTG10.18867924528301888No Hit
GGGGGGGGTTGGGGGGGGGGGGGGGGGGGGGGTGGGGGGTGGTGGGGGGGG10.18867924528301888No Hit
GACTGGAAACCCTGTCTCTATACACATCTGACGCTGCCGACGAATTAGACG10.18867924528301888No Hit
GACTGGGAAACCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGAC10.18867924528301888No Hit
GAATGGGAAACCATTTCTCTAATAAAAATCTGAAGCTGCCGACTAATTAGA10.18867924528301888No Hit
GGGGGGGTAACCCACTATCAAAAAAAAAAAAGAACCAGCCCACCAAATAGA10.18867924528301888No Hit
GGGGGGGCCGGTGTGTTGTGGTGTTGGGTTGTGTGTGGAGCTAGTGGGGTG10.18867924528301888No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGTGGCGGTGGGGGG10.18867924528301888No Hit
CTAGTGGAGACGGCTCACTGGGTGGATCCATTTTCTTCATGTTATGTAGAT10.18867924528301888No Hit
GATGTGAAGGAGGCTGTAAAAAAAGCTGGGCAGAAGTGTTTCAGCAGCAGG10.18867924528301888No Hit
GGGGGGTGGGGGGCGGGGGGGGGGGGGGTGTGGGTGGGGTGTTTGGGGTGT10.18867924528301888No Hit
GACTGGCACGATCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.18867924528301888No Hit
GGGGGGGGGGGGGGGGTGGGGGGTGGGGGGGGGGGGGGGGGGGTGGGGGGG10.18867924528301888No Hit
TGCCAAAGGAGGTGAGAGGAACAAGAAAAGAAATAGAATTCTGGCCTCACT10.18867924528301888No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGG10.18867924528301888No Hit
GCCAACTTGGACTCTCTCAGAGAAGTGAAATGCAGGTCTTGAATGAAGATG10.18867924528301888No Hit
GGGGGGGCGGGGGGGGGTGGGGGGGGGGGGGTGGTTGGGTTGGTGGGGGGG10.18867924528301888No Hit
GGGGGCACCGTATCAAAAAAAAAAAAAAACAAAACCCAAAAAAAAAAAATC10.18867924528301888No Hit
GTCAGTGGCTGGGTGTGGTGGCTCGCGCCCGTAATCCCAGCATTTTGGGAG10.18867924528301888No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGAT10.18867924528301888No Hit
GACAGGAAAGAACCAGGTCAGAACCAGCAGTATAACCCTAGCCAGGCCGAA10.18867924528301888No Hit
GGGGGGTGGGGTGTGGGGGGGGGGGGTGTGGGGTGGTGTGGGTGGGTGGTG10.18867924528301888No Hit
GGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.18867924528301888No Hit
GCTAGGACCTGGCTGTATTTTCCATCCTTTACATCCTTCTGTCTGTCTCTT10.18867924528301888No Hit
GACTGGCACGCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGACG10.18867924528301888No Hit
GACTGGGAAACCCTGTCTCTTATACACATTGACGCTGCCGACGAATTAGAC10.18867924528301888No Hit
GTTTTTTTCAAGGGAAATATTTTTTCTCTGTGAAAGGTCAGTAGTAAAAGA10.18867924528301888No Hit
CTCCCAAAGGTGCTGCAGCTCCAGCACCAGGGGCCAGGGCTGCGGCGACAG10.18867924528301888No Hit
GACAGGGAAAAACTGTATCTTAAACAAAAATTACCCTGACGACGAAATAGA10.18867924528301888No Hit
ACCATTCTACCTCGCAACACAGAGGTCACTACTGACGGAGACAGCTATTAT10.18867924528301888No Hit
TACTGGTAAAACCTGTCTCTTATACACATCTGACTCTGCCGACGAATTAGA10.18867924528301888No Hit
ACAAACTCCAGGGCCTTCCTCTTTTTCCGGAGTGCCCTTTTTTCATTAGCC10.18867924528301888No Hit
GACTGGCACGCTCCTGTCTCTTATACACATCTGACGCTGCCGACGACTTAG10.18867924528301888No Hit
GGGGGGTGGGGGGGGGGGGGGTTTTTGGGTGGGGTGGGGGGGGGGGGGGGG10.18867924528301888No Hit
GACTGGCAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGAATTAGA10.18867924528301888No Hit
GATGATACAATGGGGACAGCATAAACCTGATGACAAGGACAAGTTTCTAAA10.18867924528301888No Hit
GGGGCACTGGCATCGTCTCCGCACCTGTGCCTAAGAAGCTGCTCATGATGG10.18867924528301888No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGAAGAATTAGA10.18867924528301888No Hit
GACTGGTAAACCCTGTCTCTTATACACATCTGACGCTGCCGACTAATTAGA10.18867924528301888No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)