FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31650
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG2866690.57187993680886No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACTAGCGCTCAT2760.8720379146919431No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG1260.3981042654028436No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1200.37914691943127965No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC1030.325434439178515No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC970.30647709320695105No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCTGCTTGGCGAGG700.22116903633491314No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG680.21484992101105846No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG580.18325434439178515No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG570.18009478672985782No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCTGCTTGGCGAGG570.18009478672985782No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG530.1674565560821485No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTTGCGAGG520.16429699842022116No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGATG520.16429699842022116No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC520.16429699842022116No Hit
GGTTTCCCAGTCCACTTACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC510.16113744075829384No Hit
GGTTTCCCGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC490.15481832543443919No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCTAGG480.15165876777251183No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG470.1484992101105845No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCTGCTTGGCGAGG450.14218009478672985No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCTGCTTGGCGAGG410.12954186413902052No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTACTTGGCGAGG400.1263823064770932No Hit
GGGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAG390.12322274881516589No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC380.12006319115323856No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG340.10742496050552923No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGGC320.10110584518167456No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)