FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences220
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTGAGCGAT12456.36363636363636No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG3716.818181818181817No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG73.1818181818181817No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTGA73.1818181818181817No Hit
ATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCTCATGTTGGAGACGT31.3636363636363635No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTGAGCGATC31.3636363636363635No Hit
GGTTTCCCAGTCCTGTCTCTTATACACACTCCGAGCCCACGAGACACTGAG10.45454545454545453No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACAATCTCCGAGCCCACGAGACACTGAGCGATC10.45454545454545453No Hit
GTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC10.45454545454545453No Hit
CCTAATTGGATAGCATTAAATGAGGTAAATTTCAACATTGATTATTGTATG10.45454545454545453No Hit
GGTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTGAGCGATC10.45454545454545453No Hit
GTTTAAAAAAGAGCTTACCTCCAACTATTCACTATCTCACTTCCCAAGCAA10.45454545454545453No Hit
GGTTTCCCAGTCCACTATATACATCTCCGAGCCCACGAGACACTGAGCGAT10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACTGTCTCTTATACACATCTCCGAGCCCACGAG10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCTAGG10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTAAGCGAT10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACACTGAGCTAT10.45454545454545453No Hit
GGTTTCCAAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTGA10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG10.45454545454545453No Hit
CTCAGTTCGTTCTTTGTGGAATTGTGTGTCGTCAAGAGAATAGCGATGGGG10.45454545454545453No Hit
GGTTACCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG10.45454545454545453No Hit
GTTTCCCAGTCCATATACACATCTCCGAGCCCACGAGACACTGAGCGATCT10.45454545454545453No Hit
GGGCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATAGAGGATCT10.45454545454545453No Hit
GGTTTCCCTGTCCACTATACACATCTCCGAGCCCACGAGACACTGAGCGAT10.45454545454545453No Hit
GCTTTAATGAGAAACAGTGTGGTCTTCATGGGCTTAGAAATTACTAGATCA10.45454545454545453No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCGAGCCCACGAGACACTGAG10.45454545454545453No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCCCCGAGCCCACGAGACACTGA10.45454545454545453No Hit
GGTTTCCCAGTCCAATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACACATCTGCGTGCCAGTCCTGTCTCTTATACA10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGAAACTGAGCGAT10.45454545454545453No Hit
GTTTGTCCTTGGAGACCTTCAGTAACTCCATGGCGCGCCGCTCGTACGGGG10.45454545454545453No Hit
ACATTCTATCACAGTGATGTATGGTCAGACTTAACAGCCCCAATTGTTAAA10.45454545454545453No Hit
TCTTTGGTGGTATCAGTACATCTGCCCTTGCCACTTTGCAATCCATTGTCC10.45454545454545453No Hit
GGTTTGCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTGA10.45454545454545453No Hit
CCAAAACATTCCATCTACTTGAGTAAATCTCAGTAAATAACACAATATACA10.45454545454545453No Hit
GCTAATTAGTGTTCTTTTGTTTCAACTTGAAAAACTGCCTTCAGTTTTTCT10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGA10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG10.45454545454545453No Hit
GCCTGTGGCGACCAGGACCAGGTCTCTCTATCATGCCATGGTCTCTCAGGC10.45454545454545453No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAAAAGGAGCCGCTTGGCGAGG10.45454545454545453No Hit
GGTTTCCCAGGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACACTGA10.45454545454545453No Hit
GGTTTCCCAGTCCTGTCTCTTATCACATCTCCGAGCCCACGAGACACTGAG10.45454545454545453No Hit
GGTTTCCCAGTGCACTATACACATCTCCGAGCCCACGAGACACTGAGCGAT10.45454545454545453No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)