FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences172
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAAGACAT9856.97674418604651No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG2112.209302325581394No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCTAA74.069767441860465No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGATACCCTAAGACAT52.9069767441860463No Hit
GGTTTCCCAGTCCTGTCTCTATACACATCTCCGACCCACGAGACCCTAAGA21.1627906976744187No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG21.1627906976744187No Hit
ATGACCGGCCCAGCAGTCTCTTATACACATCTCCGAGCCCACGAGACCCTA21.1627906976744187No Hit
GGTTTCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCTAAG21.1627906976744187No Hit
AGGACAGATTCCATCTTATACCTCCAAATCTTCCCTTCCTCCCAGGATATG10.5813953488372093No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGTCGCTTGGCGAGG10.5813953488372093No Hit
ATGACCTGTCCTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTC10.5813953488372093No Hit
CGTTTGTCAGGCTCGTCCCCAACTCCTGACCTCAGATGATCCACCCGCCTT10.5813953488372093No Hit
GGTTTCCCAGTCCACTATACTGTCTCTTATACACATCTCCGAGCCCACGAG10.5813953488372093No Hit
CTCAAATGGGAGGGGAGAGAAAGAAGGAAAAGAAAAGTATATGGTGATTTC10.5813953488372093No Hit
GGTTTCACAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
GGTTTCCCAGTCAACTATACACATCTCCGAGCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGAACACGAGACCCTAAGACAT10.5813953488372093No Hit
GGTTTCCCAGTCCACTATACAATCTCCGAGCCCACGAGACCCTAAGACATC10.5813953488372093No Hit
GGTTTCCAGTCCCTATACACATCCCGAGCCCACGAGACCCTAAGACATCTC10.5813953488372093No Hit
GGATTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
GGTGTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG10.5813953488372093No Hit
AGGAGTATGAGTTCCTCACACCAGTTGAGGAGGCTCCCAAGGGCATGCTGG10.5813953488372093No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCAGCCCACGAGACCCTAAG10.5813953488372093No Hit
GCTGAACGGATGGCTGAGGGAGCCCCGCGGATCGTTTAGGAAAGCCGGCCA10.5813953488372093No Hit
GGTTCCAGTCATATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCG10.5813953488372093No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGATACCCTAA10.5813953488372093No Hit
GGTTTCCCAGTCCACTATACTGCCAGTCCTGTCTCTTATACACATCTCCGA10.5813953488372093No Hit
GGTTTCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAAGACATC10.5813953488372093No Hit
GGATTCCCAGACCACTATACACATCTCCGAGCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
CCTCAACTCCTGGCTCAATACTGATGGAAGTAATCTGCTTAACAATCTCAG10.5813953488372093No Hit
GGTTTGCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
GGTTACCCAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
CTCAAAGGGGAGGGGAGAGAAAGAAGGAAAAGAAAAGTATATGGTGATTTC10.5813953488372093No Hit
GGTTTCCCAGTCCACTATACACATCACCGAGCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCCAA10.5813953488372093No Hit
GGTTTACCAGTCCACTATACACATCTCCGAGCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
GGTTTCCCAGTCCACTATACACATCTACTAGCCAACGAGACCCTAATAAAT10.5813953488372093No Hit
GGTTTCCCAGTCCACTATACACATCTCCGATCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
GGTTTCCCAGTCCACTATACACATCTCCTAGCCCACGAGACCCTAAGACAT10.5813953488372093No Hit
CCTATATTGCGACCTAGTTGGACTTTCGTTTAAAAAAAAAGTCTAAATTAT10.5813953488372093No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC10.5813953488372093No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)