FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences172
Sequences flagged as poor quality0
Sequence length51
%GC87

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11164.53488372093024No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT2212.790697674418606No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA116.395348837209303No Hit
GACTGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGAG21.1627906976744187No Hit
CCTGTAACTCCCATTAGTGTTAATGGGAGTTTCAGCAAGCGTATCGAGGGG21.1627906976744187No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGACT10.5813953488372093No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGCGGGGGG10.5813953488372093No Hit
CTGGGCCGGTCATCTGTCTCTTATAAACATCTGACGCTTCCGACGACCGAG10.5813953488372093No Hit
GGGGGGTGGTGGTGTGGGGTGTGGGTGGGGGGGTGTGGGGGGGGGGGTGGG10.5813953488372093No Hit
GACTGGGAAACCCTGTCTCTTTACACATCTGACGCTGCCGACGACGGAGAG10.5813953488372093No Hit
CATATCCTGGGAGGAAGGGAAGATTTGGAGGTATAAGATGGAATCTGTCCT10.5813953488372093No Hit
GTTATTCCTCTTCTCATCCAAAGCTCATCCATTTACCTGTGCTCTCTCTAC10.5813953488372093No Hit
GACTGGCACGCTCCATGATCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT10.5813953488372093No Hit
GGGGGGTGTATGTTATAAAAAAAATACGCAGACCAACACCGAGACAGTGTA10.5813953488372093No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCTGCT10.5813953488372093No Hit
GGGGGGGGGGTGTGGGGGTTGTGGGGGGGGGGGGGGGGTGGGGGGGGGGGG10.5813953488372093No Hit
CTGGGCCGGTCATCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAG10.5813953488372093No Hit
GACTGGCAGTATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACG10.5813953488372093No Hit
GCACTTTGTGAGGCCAATGCGGGTGGATCATCTGAGGTCAGGATTTGGGGA10.5813953488372093No Hit
GGGGGGTGGGGTGTGGGGGGGGGGGTGGGTGGGGGGGTGGGGGGGGGTGTG10.5813953488372093No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.5813953488372093No Hit
GGGGGGGGGGTGGGGTGGGGTGCGGGGGTGGGGGGGGGGGGGTGTGGGTGT10.5813953488372093No Hit
GGTAAGACAGGGAAATATTAAATGATTGTGTACTGAGATGGAGACGTGGAA10.5813953488372093No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGG10.5813953488372093No Hit
TATAGTGGACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACG10.5813953488372093No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT10.5813953488372093No Hit
GGGGGGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGTGGGGGG10.5813953488372093No Hit
CCAAGACTTTGAGAATCACTACAAGAAAAACTCCTTGTGGTGAAGGTTCTA10.5813953488372093No Hit
GCTTCTCATAGGACAATCGCAAAAATCCAAACTTAGTCATCTTGACATGAA10.5813953488372093No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)