FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6186
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG466975.47688328483673No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG5018.098933074684773No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACGGAGCTACAT1312.117685095376657No Hit
GGGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG841.3579049466537343No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG390.6304558680892337No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGATCCGCTTGGCGAGG230.3718073068218558No Hit
GGTGTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG230.3718073068218558No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGTGAGG190.30714516650501134No Hit
GGTTTCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC160.25864856126737795No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAGG140.22631749110895572No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG140.22631749110895572No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGTCGCTTGGCGAGG140.22631749110895572No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATTAGCCGCTTGGCGAGG140.22631749110895572No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCGTGGCGAGG130.21015195602974457No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC130.21015195602974457No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCAAACATGAGCCGCTTGGCGAGG130.21015195602974457No Hit
GGTTTCCCAGTCCACATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC120.19398642095053348No Hit
GGTTTCCCAGTCCATATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC100.1616553507921112No Hit
GGTTTCCCAGTCCCTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC100.1616553507921112No Hit
GGTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC100.1616553507921112No Hit
GGTTTCCCCGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG90.1454898157129001No Hit
GGTTTCCCAGTCCACTATACTTACGTCTCCAACATGAGCCGCTTGGCGAGG90.1454898157129001No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGACGCTTGGCGAGG90.1454898157129001No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAGG80.12932428063368898No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG80.12932428063368898No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCCGCTTGGCGAGG80.12932428063368898No Hit
GGTTTACCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG80.12932428063368898No Hit
TGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG70.11315874555447786No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG70.11315874555447786No Hit
GGTTTCCCAGTCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAGC70.11315874555447786No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGC70.11315874555447786No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGATG70.11315874555447786No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)