FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6186
Sequences flagged as poor quality0
Sequence length51
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT496580.26188166828322No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCAGCT5328.600064662140316No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1662.6834788231490463No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCACCAAGCGGCT200.3233107015842224No Hit
GACTGGCACGCTCCATTACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT160.25864856126737795No Hit
GACTGGCACGCTCCGTGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT160.25864856126737795No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGACT140.22631749110895572No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCACGCGGCT130.21015195602974457No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCG120.19398642095053348No Hit
GACTGGGAAACCCTGTCTCTTATACACATCTGACGCTGCCGACGACGGAGA110.17782088587132233No Hit
GACTGGCACGCTCCATGACCGGCCAAGCAGTCTCTGCCTCGCCAAGCGGCT110.17782088587132233No Hit
TACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT100.1616553507921112No Hit
GACTGGCACGCTCCATGACCGGCCCAGTAGTCTCTGCCTCGCCAAGCGGCT90.1454898157129001No Hit
GACTGGCACGCTACATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT90.1454898157129001No Hit
GACTGACACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT90.1454898157129001No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAAGTGGCT80.12932428063368898No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCAATCGGCT80.12932428063368898No Hit
GACTGGCACGCTCCATGACCGGCCCAGCAGTCTCTGCCTCGCCCAGCGGCT70.11315874555447786No Hit
GACTGGCACGCTCCATGGCCGGCCCAGCAGTCTCTGCCTCGCCAAGCGGCT70.11315874555447786No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)