FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216343

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216343
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11355
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGAA1471.2945838837516512No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG730.6428885953324527No Hit
AGATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGAAGC240.21136063408190223No Hit
ACAGATGACCGGCCCAGCTGTCTCTTATACACATCTGACGCTGCCGACGAA200.17613386173491855No Hit
CAGATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGAAG140.12329370321444298No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)