FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216405

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216405
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57883
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGATAAAGGGGAATTTCCATGCCGTCTACAGGGATGACCTGAAGAAATT2080.3593455764214018No Hit
GCAGACGTCTGGTTCAAAGAGTTGGATATCAACACTGATGGTGCAGTTAAC1650.2850577889881312No Hit
GACGTCTGCACCCTTTTTCCTGATATACTGAGGACACTCGGTCTCTAGCAA1110.19176614895565192No Hit
AGTAACTCAGCTACTCTTTGTGGCTTTCTTCATGGCTTTTTTTGTGGGCTG610.10538500077743033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)