FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216415

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216415
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3678
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGAC1203.262642740619902No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG521.4138118542686242No Hit
ACAGATGACCGGCCCAGCTGTCTCTTATACACATCTGACGCTGCCGACGAC260.7069059271343121No Hit
AGATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGACTT220.5981511691136487No Hit
ACAGATTACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGAC130.35345296356715605No Hit
CAGATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGACT80.2175095160413268No Hit
GAGACAGATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGAC70.19032082653616098No Hit
GGGGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.1631321370309951No Hit
GACAGATGACCGGCCCAGCAGTCTCTTATACACATCTGACGCTGCCGACGA50.13594344752582926No Hit
CCTGCCAGCACCGTTTTTGTGGTTAGCTCCTTCTTGCCAACCAACCATGAG40.1087547580206634No Hit
GCTCTCCCAGTCATCACAGTCTGGTTTCTTGATATCCTGAAGGAAGATTCG40.1087547580206634No Hit
GGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1087547580206634No Hit
AGATGTGTATAAGAGACAGATGACCGGCCCAGCAGTCTCTTATACACATCT40.1087547580206634No Hit
GTGTATAAGAGACAGATGACCGGCCCAGCAGTCTCTTATACACATCTGACG40.1087547580206634No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)