FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3474641
Sequences flagged as poor quality0
Sequence length98
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG105526430.37044690372329No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAG1397534.022084583702316No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG469031.3498660724949714No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG434091.249308921410874No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGCG268120.7716480637855824No Hit
GGTTTACCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG189560.5455527635804677No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG172960.49777804383244195No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG154350.4442185538016733No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG144330.4153810422429252No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCGTGGCGAG107410.30912546073105107No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG103080.29666374166424675No Hit
GGTTTCCCAGTCCACTATACTGACTTGAGAATAAAACGGAAAAAAATGTT86700.2495221808526406No Hit
GGTTTCCCAGTCCACTATACTGACGAAGCCATTGAAACAGATGATCTGAC78010.22451240286406565No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAG63440.18258001330209364No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAG63190.18186051451070773No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCCGCTTGGCGAG59200.17037731380018828No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAG51940.14948306889834087No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCACCATGAGCCGCTTGGCGAG41810.12032897787138297No Hit
GGTTACCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG41240.11868852062702304No Hit
GGTATCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG40510.11658758415617612No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTGGGCGAG39310.11313398995752366No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGGG38510.11083159382508868No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAG37590.10818383827278846No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGCG37260.10723409986815906No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACACGAGCCGCTTGGCGAG36900.1061980216085633No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGCGCCGCTTGGCGAG36670.10553608272048824No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCCACATGAGCCGCTTGGCGAG36610.10536340301055562No Hit
NGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG34990.1007010508423748No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)