FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3116380
Sequences flagged as poor quality0
Sequence length98
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG95768830.73078379401742No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAG1274804.090643631392834No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG443131.4219382745364815No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG378891.2158016673191332No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGCG239440.7683273541737529No Hit
GGTTTACCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG171290.5496441383913386No Hit
GGTTTCCCAGTACACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG139890.4488862077153621No Hit
GGATTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG134500.43159049923308457No Hit
GGTTTCCCAGTCAACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG130200.41779243866280746No Hit
GGTTTCCAAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG95050.3050013156290311No Hit
GGTTTCCCAGTCCACTATACTGACTTGAGAATAAAACGGAAAAAAATGTT94100.3019529068983885No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCGTGGCGAG79400.25478279285581346No Hit
GGTTTCCCAGTCCACTATACTGACGAAGCCATTGAAACAGATGATCTGAC71850.2305559655754433No Hit
GGTATCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAG59340.1904132358698233No Hit
GGTTTCACAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAG56430.1810754786001707No Hit
GGTTTCCCAGTCCACTATACTGACGTCTACAACATGAGCCGCTTGGCGAG53910.17298917333572927No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCAGCTTGGCGAG45170.1449438130138173No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGACGCTTGGCGAG40950.13140246054717333No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCCACATGAGCCGCTTGGCGAG40510.1299905659771915No Hit
NGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG36170.11606415135509791No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGGG34700.1113471399508404No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGCG34410.11041657307517055No Hit
GGTTACCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG33550.10765696096111514No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCACCATGAGCCGCTTGGCGAG33250.10669430557249115No Hit
GGTTTCCCAGTCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG32310.10367798535480267No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACACGAGCCGCTTGGCGAG32300.10364589684184855No Hit
GGTTTCCCAGTCTACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG32170.10322874617344482No Hit
GGTATCACAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG31770.10194520565527954No Hit
GGTTTCCCAGTCGACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAG31360.1006295766241601No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)