FastQCFastQC Report
Wed 6 Jul 2022
EGAF00006216547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences936095
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG44900.47965217205518673No Hit
GGTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCTGCTTGGCGAGG33930.36246321153301747No Hit
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC26350.28148852413483677No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTATA22790.24345819601642996No Hit
GGTTTCCCAGTCCACTATACACATCTCCGAGCCCACGAGACAAGCAGTGGT12920.1380201795757909No Hit
CCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACCA12200.13032865254060752No Hit
CCTAGTTGGGGGGTAGGGGCTAGGCTGGAGTGGTAAAAGGCTCAGAAAAAT10550.11270223641831223No Hit
CCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGGGCT9370.10009667822176169No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)