FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216627

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216627
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28611246
Sequences flagged as poor quality0
Sequence length90
%GC46

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG26302519.193066949967855No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAGG16785005.866574283412893No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCCCATTGCCAAG3388841.1844433479059249No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCCCATTGCCAAG2754670.9627927424062552No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCCCATTGCCAAG2530170.8843270929200358No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATAACCCCATTGCCAAG2425050.8475862952630584No Hit
GTTTACCACTACACAAAAAAGACGTCACCAAAAATAACCCCATTGCCAAG2233320.7805741840114199No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATAACCCCATTGCCAAG2200910.7692464704263492No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCACATTGCCAAG1902170.6648329821078047No Hit
GTTTACCACTACACAAAAAAGACCTCACCAAAAATAACCCCATTGCCAAG1810740.6328770162613679No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1686250.5893661534349116No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCACATTGCCAAG1617970.565501411577811No Hit
GTTTACCACTACACAAAAAAGACGTCACCAAAAATAACCACATTGCCAGG1585590.5541841833801995No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATAACCCCATTGCCAAG1491980.5214662793783954No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCACATTGCCAAG1464980.5120294306651307No Hit
GTTTACCACTACACAAAAAAGACGTCACCAAAAATAACCACATTGCCAAG1319160.4610634573551952No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCCCATTGCCAGG1270050.4438988780845126No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATAACCACATTGCCAAG1260900.4407008349094618No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATAACCACATTGCCAAG1233730.43120456900059506No Hit
GTTTACCACTACACAAAAAAGACCTCACCAAAAATAACCCCATTGCCAGG1162560.40632973481825996No Hit
GTTTACCACTACACAAAAAAGACCTCACCAAAAATAACCACATTGCCAAG1109890.38792088956908766No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCCCATTGCCAGG991670.3466014727216004No Hit
GTTTACCAATACACAAAAAAGACCTCACCAAAAATAACCCCATTGCCAAG967250.3380663673298255No Hit
GTTTACCACTACACAAAAAATACCTCACCAAAAATAACCCCATTGCCAAG942530.3294264080634587No Hit
GTTTACCAATACACAAAAAAGAACTCACCAAAAATAACCCCATTGCCAAG892240.3118494035527149No Hit
GTTTACCACTACACAAAAAAGACCTCAACAAAAATAACCCCATTGCCAAG818300.2860064185949818No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATAACCACATTGCCAAG813210.28422739785607376No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCACATTGCCAGG755920.2642038029381873No Hit
GTTTACCACTACACAAAAAAGACCTCACCAAAAATAACCACATTGCCAGG722410.2524916251462799No Hit
GTTTACCACTACACAAAAAAGACGTCACCAAAAATATCCCCATTGCCAAG685960.23975187938337253No Hit
GTTTACCACTACACAAAAAAGACGTCACCAAAAATAACCCCATTGCGAGG628710.2197422649820983No Hit
GTTTACCAATACACAAAAAAGAACTCAACAAAAATAACCCCATTGCCAAG620330.21681334675183317No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCACATTGCCAGG589810.206146212576691No Hit
GTTTACCACTACACAAAAAATACCTCAACAAAAATAACCCCATTGCCAAG571050.19958935028554856No Hit
GTTTACCAATACACAAAAAAGACCTCACCAAAAATAACCACATTGCCAAG568830.198813431613569No Hit
GTTTACCACTACACAAAAAAGAACTAACCAAAAATAACCCCATTGCCAAG560470.19589150364161No Hit
GTTTACCACTACACAAAAAATACCTCACCAAAAATAACCACATTGCCAAG547190.191249972126345No Hit
GTTTACCACTACACAAAAAATACCTCACCAAAAATAACCCCATTGCCAGG544280.19023288954280426No Hit
GTTTACCACTACACAAAAAATACGTCACCAAAAATAACCCCATTGCCAAG543810.1900686184726104No Hit
GTTTACCACTACACAAAAAAGACCTCAACAAAAATAACCACATTGCCAAG507940.17753159020058057No Hit
GTTTACCACTACACAAAAAATACGTCACCAAAAATAACCCCATTGCCAGG502040.17546946400027458No Hit
GTTTACCAATACACAAAAAAGAACTCACCAAAAATAACCACATTGCCAAG497930.1740329659183665No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATAACCCCATTGCCAGG475730.1662737791985711No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATAACCCCATTGCCAGG467600.16343223919713248No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCCCATTGCGAGG451510.15780857638985732No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATATCCCCATTGCCAGG435890.15234918465277605No Hit
GTTTACCACTACACAAAAAAGACCTCAACAAAAATAACCCCATTGCCAGG432240.15107346251190876No Hit
GTTTACCACTACACAAAAAAGAAGTCACCAAAAATAACCCCATTGCCAGG419640.14666959977905192No Hit
GTTTACCACTACACAAAAAAGACCTAAACAAAAATAACCCCATTGCCAAG403640.14107739313415432No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCCCATTGCGAAG402320.14061603608595025No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCCCATTGCCAGG400700.14004982516315437No Hit
GTTTACCACTACACAAAAAAGAAGTCACCAAAAATAACCCCATTGCCAAG388480.13577877733811383No Hit
GTTTACCACTACACAAAAAAGACGTCACCAACAATAACCCCATTGCCAAG377960.13210190146909365No Hit
GTTTACCACTACACAAAAAAGACGTCAACAAAAATAACCCCATTGCCAAG365220.12764910692809392No Hit
GTTTACCAATACACAAAAAAGAACTCAACAAAAATAACCACATTGCCAAG358160.12518154574603285No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCACAATGCCAAG355510.12425533652047172No Hit
GTTTACCAATACACAAAAAAGAACTAAACAAAAATAACCCCATTGCCAAG347040.12129496212782903No Hit
GTTTACCACTACACAAAAAATACCTCAACAAAAATAACCACATTGCCAAG337580.11798856994903334No Hit
GTTTACCACTACACAAAAAATAACTAACCAAAAATAACCCCATTGCCAAG328430.11479052677398252No Hit
GTTTACCACTACACAAAAAATACCTCACCAAAAATAACCACATTGCCAGG315150.11014899525871749No Hit
GTTTACCACTACACAAAAAAGAACTAACCAAAAATAACCACATTGCCAAG301870.10550746374345249No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCACAATGCCAAG301690.10544455141869738No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCCCATTGCGAAG301650.10543057090208516No Hit
GTTTACCACTACACAAAAAATACGTCACCAAAAATAACCACATTGCCAAG297380.10393815075372809No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATAACCACAATGCCAAG297140.10385426765405464No Hit
GTTTACCACTACAAAAAAAATAACTAAACAAAAATAACCCCATTGCCAAG296500.10363057938825872No Hit
GTTTACCACTACACAAAAAAGACCTCACCAAAAATAACCCCATTGCGAGG290400.10149855060489152No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)