FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006216655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006216655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42383205
Sequences flagged as poor quality0
Sequence length90
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGG447972810.569582927954599No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTGGCGAGG29243886.899874608350171No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATAACCCCATTGCCAAG23816915.619421655346734No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATAACCCCATTGCCAGG10494452.476086931132273No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATAACCAAATTGCCAAG9110912.1496510233239796No Hit
GTTTACCACTACAAAAAAAATAACTAAACAAAAATAACCCCATTGCCAAG8594632.027838621453946No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATAACCCCATTGCCAAG7548151.780929497898991No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCCCATTGCCAAG6393251.5084394868203101No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATAACCACATTGCCAAG5858781.3823352905944701No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCCCATTGCCAGG5401191.2743703549554593No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATAACCCCATTGCCAGG4292481.0127785286648332No Hit
GTTTACCACTACAAAAAAAATAACTAAACAAAAATAACCAAATTGCCAAG4054080.9565298329845514No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATAACCAAATTGCCAGG3668040.8654465843250883No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCCCATTGCCAAG3433450.810096829628623No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCCCATTGCCAGG3432400.8098490899874137No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATAACCCCATTGCCAGG3209700.7573046917994993No Hit
GTTTACCACTACAAAAAAAATAACTAAACAAAAATAACCCCATTGCCAGG3061130.7222507122809613No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATATCCCCATTGCCAAG3020460.7126549301781212No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATATCCCCATTGCCAGG2988090.7050174709534118No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATATCCCCATTGCCAGG2874480.6782120417745661No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATAACCACATTGCCAGG2798170.6602072684215363No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCCCATTGCCAGG2764880.6523527420826245No Hit
GTTTACCAATACACAAAAAATAACTAAACAAAAATAACCCCATTGCCAAG2747930.6483535164459602No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATAACCAAATTGCCAAG2713670.640270125867074No Hit
GTTTACCACTACACAAAAAAGACGTCACCAAAAATATCCCCATTGCCAGG2552300.6021960821509369No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCAAATTGCCAAG2476500.5843116394807801No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATAACCACATTGCCAAG2324210.5483799538048149No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATATCCCCATTGCCAAG2268880.5353252544256623No Hit
GTTTACCACTACACAAAAAATACGTCACCAAAAATATCCCCATTGCCAGG1953040.4608051703499063No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCCCATTGCCAAG1936300.4568554926414838No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATAACCCCATTGCCAAG1808950.42680821330052787No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCAAATTGCCAGG1795990.42375039830045885No Hit
GTTTACCACTACAAAAAAAATAACTCAACAAAAATAACCCCATTGCCAAG1783090.42070673985131607No Hit
GTTTACCACTACACAAAAAAGACCTCACCAAAAATATCCCCATTGCCAAG1759700.41518804441523477No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATATCCCCATTGCCAGG1701030.4013452970345211No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCACATTGCCAGG1673990.3949654114170932No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATAACCACATTGCCAAG1650230.38935941725029993No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATAACCACATTGCCAGG1558130.36762911157851325No Hit
GTTTACCACTACAAAAAAAATAACTAAACAAAAATAACCAAATTGCCAGG1516310.35776199558292016No Hit
GTTTACCACTACAAAAAAAATAACTAAACAAAAATAACCACATTGCCAAG1495870.35293933056737925No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCACATTGCCAGG1471020.34707615905875927No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATATCCCCATTGCCAGG1435660.33873323171289194No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATATCCACATTGCCAAG1392600.32857354699815644No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATATCCACATTGCCAGG1384040.32655387906601213No Hit
GTTTACCACTACACAAAAAAGACCTCACCAAAAATATCCCCATTGCCAGG1376060.32467105779282146No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1362080.3213725814270063No Hit
GTTTACCACTACACAAAAAATACCTCACCAAAAATATCCCCATTGCCAAG1328610.31347558543531573No Hit
GTTTACCAATACACAAAAAATAACTAAACAAAAATAACCAAATTGCCAAG1309270.3089124571867559No Hit
GTTTACCACTACACAAAAAATACCTCACCAAAAATATCCCCATTGCCAGG1306000.30814092516127556No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATATCCACATTGCCAGG1303950.3076572430046289No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATAACCAAATTGCCAGG1256060.29635795594033065No Hit
GTTTACCACTACACAAAAAATAACTAACCAAAAATAACCCCATTGCCAGG1217400.2872364182935198No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCACATTGCCAAG1190290.28084001670001124No Hit
GTTTACCACTACAAAAAAAAGAACTAAACAAAAATAACCCCATTGCCAAG1184860.27955884884118604No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCAAATTGCCAAG1148320.27093750932710253No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATATCCCCATTGCCAAG1108470.2615352000869212No Hit
GTTTACCACTACACAAAAAAGACGTCACCAAAAATAACCCCATTGCCAAG1087960.25669601909529965No Hit
GTTTACCAATACACAAAAAATAACTAAACAAAAATAACCCCATTGCCAGG1079430.25468342943861844No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATAACCAAATTGCCAGG1078280.2544120955458654No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATATCCCCATTGCCAGG1019860.24062833379401108No Hit
GTTTACCAATACAAAAAAAATAACTAAACAAAAATAACCCCATTGCCAAG946360.22328655890936044No Hit
GTTTACCACTACACAAAAAAGACCTCACCAAAAATAACCCCATTGCCAAG910190.2147525181259888No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCACATTGCCAGG903790.21324248602718932No Hit
GTTTACCACTACACAAAAAATACCTCACCAAAAATAACCCCATTGCCAGG879020.20739818991980433No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCAAATTGCCAGG866110.20435217204550718No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATAACCAAATTGCCAGG863010.20362075024765117No Hit
GTTTACCACTACACAAAAAATACCTCACCAAAAATAACCCCATTGCCAAG851690.20094988097289954No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATAACCACATTGCCAGG844040.19914492072980322No Hit
GTTTACCACTACACAAAAAAGACGTCACCAAAAATAACCCCATTGCCAGG843430.19900099579538638No Hit
GTTTACCACTACAAAAAAAATAACTCAACAAAAATAACCCCATTGCCAGG811180.19139184967252948No Hit
GTTTACCACTACACAAAAAAGAACTAACCAAAAATAACCCCATTGCCAGG808160.19067930327590846No Hit
GTTTACCACTACACAAAAAATACGTCACCAAAAATAACCCCATTGCCAAG803860.18966475045952755No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATATCCACATTGCCAAG784610.18512285703735715No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATATCCCCATTGCCAAG776210.18314093990768276No Hit
GTTTACCACTACAAAAAAAATAACTCAACAAAAATAACCAAATTGCCAAG774340.1826997274038148No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATATCCCCATTGCCAGG771730.18208391743852312No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCAAATTGCCAAG734510.17330213701394218No Hit
GTTTACCACTACACAAAAAAGACCTCACCAAAAATAACCCCATTGCCAGG733370.17303316254634352No Hit
GTTTACCACTACACAAAAAAGAAGTCACCAAAAATAACCCCATTGCCAGG730830.17243386855713247No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATATCCAAATTGCCAAG719710.16981018778546833No Hit
GTTTACCAATACACAAAAAAGAACTAAACAAAAATAACCCCATTGCCAAG711910.16796983616505642No Hit
GTTTACCACTACACAAAAAATAACTAACCAAAAATATCCCCATTGCCAGG709110.16730919712183162No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATATCCCCATTGCCAAG689910.1627791008254331No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATAACCAAATTGCCAAG686190.16190139466800588No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATATCCAAATTGCCAAG684490.16150029239176225No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACAAAACAAACAAAAAACAC684180.16142715021197665No Hit
GTTTACCACTACACAAAAAATAACTAACCAAAAATAACCCCATTGCCAAG679570.16033945521581014No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATATCCACATTGCCAGG666140.15717074723348554No Hit
GTTTACCACTACACAAAAAAGAAGTCACCAAAAATATCCCCATTGCCAGG643630.1518596812109891No Hit
GTTTACCACTACACAAAAAATAAGTCACCAAAAATAACCCCATTGCCAGG616120.14536890261130558No Hit
GTTTCCCAGTCCACTATACTGACGTCTCCAACATGAGCCACTTTAGCCAA602050.14204919141910102No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATATCCAAATTGCCAGG601700.1419666115386979No Hit
GTTTACCACTACACAAAAAATAACTCACCAAAAATATCCAAATTGCCAGG599250.14138855237587625No Hit
GTTTACCACTACACAAAAAATAACTCAACAAAAATATCCACATTGCCAGG598930.14131305077093625No Hit
GTTTACCACTACAAAAAAAAGAACTAAACAAAAATAACCCCATTGCCAGG576540.13603029785029236No Hit
GTTTACCACTACAAAAAAAAGAACTAAACAAAAATAACCAAATTGCCAAG569940.13447307724840535No Hit
GTTTACCACTACACAAAAAAGAACTAAACAAAAATATCCCCATTGCCAAG563810.13302674962877395No Hit
GTTTACCACTACACAAAAAATACCTAAACAAAAATAACCCCATTGCCAAG551360.13008926531157802No Hit
GTTTACCAATACACAAAAAATAACTAAACAAAAATAACCACATTGCCAAG536680.12662562918495662No Hit
GTTTACCACTACACAAAAAAGAACTAACCAAAAATATCCCCATTGCCAAG531380.12537513385313828No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAAAAACCCCATTGCCAAG526620.12425204747965614No Hit
GTTTACCACTACAAAAAAAATAACTAAACAAAAAAAACCCCATTGCCAAG521450.12303222467484466No Hit
GTTTACCACTACACAAAAAAGAACTCAACAAAAATATCCACATTGCCAGG517610.12212620541556497No Hit
GTTTACCACTACACAAAAAAGAACTAACCAAAAATAACCCCATTGCCAAG515080.12152927085150828No Hit
GTTTACCAATACAAAAAAAATAACTAAACAAAAATAACCAAATTGCCAAG497580.11740027683135336No Hit
GTTTACCACTACACAAAAAAGAACTCACCAAAAATAACCACATTGCCAAG488710.11530746671942341No Hit
GTTTACCACTACACAAAAAAGAACTAACCAAAAATATCCCCATTGCCAGG477290.11261300319312803No Hit
GTTTACCAATACACAAAAAATAACTAAACAAAAATAACCAAATTGCCAGG463830.1094372169353403No Hit
GTTTACCACTACACAAAAAAGAAGTCACCAAAAATAACCCCATTGCCAAG450140.10620716389900196No Hit
GTTTACCACTACAAAAAAAAGAACTCAACAAAAATAACCCCATTGCCAAG442580.10442343848229504No Hit
GTTTACCACTACACAAAAAATAACTAACCAAAAATATCCCCATTGCCAAG439940.10380055024154025No Hit
GTTTACCACTACACAAAAAATAACTAACCAAAAATAACCAAATTGCCAGG431090.10171245897991905No Hit
GTTTACCACTACAAAAAAAATAACTAAACAAAAATAACCACATTGCCAGG430650.10160864427312657No Hit
GTTTACCACTACACAAAAAATAACTAAACAAAAATATCCAAATTGCCAGG430540.10158269059642848No Hit
GTTTACCAATACACAAAAAATAACTCAACAAAAATAACCCCATTGCCAAG430020.10146000048840101No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)