FastQCFastQC Report
Tue 12 Jul 2022
EGAF00006219730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006219730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111176267
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2487370.22373210282370784No Hit
ACTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTAT1392020.12520837743184884No Hit
CTTTGTGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATT1186260.10670083031300197No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)