FastQCFastQC Report
Thu 7 Jul 2022
EGAF00006219740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006219740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88818959
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5779250.6506775203253621No Hit
TGTTTGACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCA1002560.11287680144956438No Hit
TGTTTGAGGGGGTGATCTAAAACACTCTTTACGCCGGCTTCTATTGACTTGGGTTAATCGTGTGACCGCGGTGG899520.10127567471264777No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)