FastQCFastQC Report
Fri 8 Jul 2022
EGAF00006219755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006219755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84923031
Sequences flagged as poor quality0
Sequence length100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAGTTATTTCTAGTTAATTCATTATGCAGAAGGTATAGGGGTTAGTCCT1388560.16350805943325314No Hit
CTCTACCTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCT1373800.16177001501512586No Hit
CAAAGTTATTTCTAGTTAATTCATTATGCAGAAGGTATAGGGGTTAGTCC1275880.15023957399730586No Hit
TATCACCAGGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCTTCCCACT1271370.14970850486954476No Hit
GTCTGGTTTCGGGGGTCTTAGCTTTGGCTCTCCTTGCAAAGTTATTTCTA1252660.14750533338830074No Hit
AACCAGCTATCACCAGGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCT1219720.14362652694296793No Hit
TTATTTCTAGTTAATTCATTATGCAGAAGGTATAGGGGTTAGTCCTTGCT1123810.13233277083574657No Hit
TATCTTGGACAACCAGCTATCACCAGGCTCGGTAGGTTTGTCGCCTCTAC1120250.1319135677105072No Hit
TACATAGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGTT1106950.1303474436752028No Hit
ATCTTGGACAACCAGCTATCACCAGGCTCGGTAGGTTTGTCGCCTCTACC1096940.1291687292696842No Hit
TATTTCTAGTTAATTCATTATGCAGAAGGTATAGGGGTTAGTCCTTGCTA1076620.12677597435258758No Hit
AAATTTAAAGTTGAACTAAGATTCTATCTTGGACAACCAGCTATCACCAG1064970.12540414390061042No Hit
AGAAGGTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTT1056040.12435260347690605No Hit
TATTTTGCTACATAGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTC1048310.12344236747743967No Hit
TCTCCTTGCAAAGTTATTTCTAGTTAATTCATTATGCAGAAGGTATAGGG1042710.12278294683099569No Hit
CCTCTACCTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTC1022910.12045142383106887No Hit
GGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGTTTCGGGGGTC1015220.11954589797907708No Hit
TCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGTTTCGGGGGTCTTAGCTTT1000290.11778783543418274No Hit
CTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCTTTTAGC993800.11702361400642894No Hit
GGTAGGTTTGTCGCCTCTACCTATAAATCTTCCCACTATTTTGCTACATA992100.11682343273875848No Hit
GCCTCTACCTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCT986660.1161828526822129No Hit
AAGTTATTTCTAGTTAATTCATTATGCAGAAGGTATAGGGGTTAGTCCTT985310.11602388520494517No Hit
AGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGTTTCGGG984650.11594616777161429No Hit
TACCTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCTTTT982800.11572832345091405No Hit
ATTTTGCTACATAGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCG971020.11434118501964442No Hit
TCTACCTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCTT966460.11380422820754008No Hit
TATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCTTTTAGCT965970.11374652890097624No Hit
TAAGATTCTATCTTGGACAACCAGCTATCACCAGGCTCGGTAGGTTTGTC957990.1128068544797936No Hit
CGCCTCTACCTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGC955440.11250658257828787No Hit
CAGCTATCACCAGGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCTTCC951040.1119884663560819No Hit
CTTGGACAACCAGCTATCACCAGGCTCGGTAGGTTTGTCGCCTCTACCTA945410.111325513099032No Hit
TAGAGGGTTCTGTGGGCAAATTTAAAGTTGAACTAAGATTCTATCTTGGA926810.10913529452334315No Hit
ATAGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGTTTCG913640.10758447846733121No Hit
ATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCTTTTAGCTG913040.10751382625521219No Hit
AGCTATCACCAGGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCTTCCC907370.1068461628506877No Hit
TTTAAAGTTGAACTAAGATTCTATCTTGGACAACCAGCTATCACCAGGCT894050.105277683741646No Hit
AGAGGGTTCTGTGGGCAAATTTAAAGTTGAACTAAGATTCTATCTTGGAC881880.10384462137249906No Hit
CTACATAGACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGT871570.10263058086092099No Hit
CCTATAAATCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCTTTTAG871220.10258936707051826No Hit
CAAATTTAAAGTTGAACTAAGATTCTATCTTGGACAACCAGCTATCACCA870600.10251635978466196No Hit
AGGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCTTCCCACTATTTTGC865370.10190050800235803No Hit
AGTTATTTCTAGTTAATTCATTATGCAGAAGGTATAGGGGTTAGTCCTTG861140.10140240990691914No Hit
AAGGGGATTTAGAGGGTTCTGTGGGCAAATTTAAAGTTGAACTAAGATTC860100.10127994607257954No Hit
AGGTTTGTCGCCTCTACCTATAAATCTTCCCACTATTTTGCTACATAGAC859160.10116925760692644No Hit
TCTATCTTGGACAACCAGCTATCACCAGGCTCGGTAGGTTTGTCGCCTCT858280.10106563436248525No Hit
ACCAGGCTCGGTAGGTTTGTCGCCTCTACCTATAAATCTTCCCACTATTT855920.10078773566148387No Hit
ATTATGCAGAAGGTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTAT850110.10010358674079826No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)