FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006263614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22752589
Sequences flagged as poor quality0
Sequence length42
%GC23

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA9251984.066341636989092No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5307592.3327411223399674No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3765711.655068792391055No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1851450.8137315713829314No Hit
GAATAATGCTGACTGTTTATTTATAACTAAGAGTATAATTGG989410.4348560069361777No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA631380.27749809043709267No Hit
TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA579280.2545995974348238No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA575490.2529338529342749No Hit
GCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA562680.24730372442450396No Hit
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA496100.21804112050720909No Hit
TCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA420690.18489763956093086No Hit
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA403790.1774699134239185No Hit
CCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA398220.17502184037166058No Hit
AACCTTGTCCTCTCAATTTTATGGACAAACACCCACATTAAT329930.14500767363221828No Hit
GTGATAGCCCCCTTTTTCTCACAAGTGGAACAAAGACAGGGA311250.13679761894349693No Hit
GCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA305650.13433636057856976No Hit
TGTTTTTGTAGAATCTGGAAGTAGATATTTGGATACCTTTGA274840.12079504446724722No Hit
ACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA266810.11726577577611057No Hit
CGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA251570.11056763694013019No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)