FastQCFastQC Report
Thu 21 Jul 2022
EGAF00006263615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19521877
Sequences flagged as poor quality0
Sequence length42
%GC28

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT244908012.545310064191062No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT812960.4164353663328583No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACC588080.3012415250849086No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT526100.26949252881779756No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT521410.2670900958960043No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT478990.24536062797650043No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT229500.11756041696195504No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)