FastQCFastQC Report
Sat 16 Jul 2022
EGAF00006263620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21233069
Sequences flagged as poor quality0
Sequence length42
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5882602.7704897487970297No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1346730.6342606431505498No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA550600.2593124903423052No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA270590.1274380071952858No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)