FastQCFastQC Report
Tue 26 Jul 2022
EGAF00006263621

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263621
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26112050
Sequences flagged as poor quality0
Sequence length42
%GC25

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT509398419.5081734295086No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1694420.6489034755984305No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1019500.3904327695450951No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT910920.34885043495244533No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT891450.34139410731826875No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT394370.15102988849975393No Hit
TCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACC389260.14907293759011644No Hit
TTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT269300.10313246183275537No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)