FastQCFastQC Report
Thu 21 Jul 2022
EGAF00006263629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18486161
Sequences flagged as poor quality0
Sequence length42
%GC31

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8118474.391647351767627No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT400530.21666477966950523No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT246270.13321857361298542No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT238640.12909116176149282No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT225750.12211837817489526No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)