FastQCFastQC Report
Thu 21 Jul 2022
EGAF00006263631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22244896
Sequences flagged as poor quality0
Sequence length42
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14246096.404206160370451No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT666270.2995158979390149No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT412070.18524249337915538No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT409810.18422652998692374No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT390140.17538405214391653No Hit
TCTTTTTTTCATAATCAGGTTAGTGTAAGAAATTGCCATTTG317860.14289120524546395No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)