FastQCFastQC Report
Sun 24 Jul 2022
EGAF00006263636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14942949
Sequences flagged as poor quality0
Sequence length42
%GC23

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3244482.1712447790593408No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1339320.8962889453748386No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA545710.36519565180875607No Hit
AAGAGCGCCAGCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTT238030.15929251983661324No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA234570.156977046498653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)