FastQCFastQC Report
Sat 16 Jul 2022
EGAF00006263637

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263637
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22967856
Sequences flagged as poor quality0
Sequence length42
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15334476.676491702142333No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT662070.2882593830264349No Hit
TCTTTTTTTCATAATCAGGTTAGTGTAAGAAATTGCCATTTG650690.2833046323522753No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT422290.18386130599216574No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT416740.1814448854085466No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT393770.17144395193003648No Hit
TTTGGCCTCTGACCCTTTTTCCACAGGGGACCTACCCCTATT391170.17031193508005274No Hit
TTTTCTTTACTATTCTTTTTAAAAAAAGTTTCACTGTGTAGA252630.10999285261976564No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)