FastQCFastQC Report
Thu 21 Jul 2022
EGAF00006263638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22967856
Sequences flagged as poor quality0
Sequence length42
%GC24

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5000602.177216715395638No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1426720.6211811846956895No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA527260.22956430935477828No Hit
CCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA250990.10927881122208358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)