FastQCFastQC Report
Sat 16 Jul 2022
EGAF00006263642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006263642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22825573
Sequences flagged as poor quality0
Sequence length75
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1074490.47073955164236186No Hit
CCCCTGAACTCTACACAACATATTTTGTCACCAAGACCCTACTTCTGACCTCCCTGTTCTTATGAATTCGAACAG377310.16530143624433877No Hit
TCCCCTGAACTCTACACAACATATTTTGTCACCAAGACCCTACTTCTGACCTCCCTGTTCTTATGAATTCGAACA326200.14290988445284591No Hit
CAACACTTTCTCGGCCTATCCGGAATGCCCCGACGTTACTCGGACTACCCCGATGCATACACCACATGAAATATC315380.13816958724322057No Hit
CTCCCCTGAACTCTACACAACATATTTTGTCACCAAGACCCTACTTCTGACCTCCCTGTTCTTATGAATTCGAAC312060.13671507830274404No Hit
CCCCCTGAACTCTACACAACATATTTTGTCACCAAGACCCTACTTCTGACCTCCCTGTTCTTATGAATTCGAACA305180.1337009151971782No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)