FastQCFastQC Report
Thu 21 Jul 2022
EGAF00006414169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8641696
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCAGTGGTATCAACGCAGAGTACA117010.1354016618959982Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GTGTGTGTGTGTGTGTGTGTGTGTGT99810.11549816147200735No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)