FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42315864
Sequences flagged as poor quality0
Sequence length35-75
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC9291042.1956399141466187No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT5217061.2328851420828841No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG3196970.755501530111733No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC2260500.534196820369779No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)