FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58155393
Sequences flagged as poor quality0
Sequence length35-75
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC1298860.22334300105237015No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1225180.21067349678128736No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC1124960.19344035728552295No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)