FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76992839
Sequences flagged as poor quality0
Sequence length35-75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC12032601.5628206669973554No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT7819601.0156269208361053No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC6975880.9060427035298699No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG5774290.7499775401190233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)