FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92536587
Sequences flagged as poor quality0
Sequence length35-75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT18561872.0058952466012174No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC18378451.9860738974520427No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC15378731.6619080623753717No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG9326261.007845685944739No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)