FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42032845
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA20285294.826056861009527No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACAC16345283.888692283379819No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG15236973.625015151841376No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT7263921.728153304873843No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA1188080.28265514742102277No Hit
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG759170.18061351783349427No Hit
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC606820.1443680531260732No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)