FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414773

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414773
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42032845
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG17481484.159004702156135No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA15323643.645634741117333No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT9982762.374990320069936No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACAC8147451.938353209258141No Hit
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC1336430.31794897537865924No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA889740.21167732043833815No Hit
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG706000.16796388633698242No Hit
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT676070.16084326435671914No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)