FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100333216
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTTGTCAACTAGCGGTGATCCTGCCCCCCAGAGGACAGTAGGCAGTGT2859810.2850312303355252No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACAC2435330.24272420411601278No Hit
TTCAGGGATGCTTGAAGGTCTTGGGATGTAAAAGTCAAAGGTCTCTTGTG1626230.16208291379795897No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA1617990.16126165037907286No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG1398130.1393486679426283No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)