FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414949

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414949
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100333216
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTTGTCAACTAGCGGTGATCCTGCCCCCCAGAGGACAGTAGGCAGTGT2916150.2906465192942684No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACAC1811010.18049954663069903No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA1704620.16989587974534773No Hit
TTCAGGGATGCTTGAAGGTCTTGGGATGTAAAAGTCAAAGGTCTCTTGTG1542940.1537815751864268No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG1489490.14845432643163756No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1241490.12373668955254062No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)