FastQCFastQC Report
Sat 6 Aug 2022
EGAF00006414975

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414975
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences904797
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACACACACACACACACACACACACACACACACACACACACACACACAC793108.765502096050275No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT602676.660831103551404No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG187602.0733932583772936No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA80110.8853919719008794No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG34580.3821851752382026No Hit
ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT10350.11439029970258523No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)