FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10430545
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACACACACACACACACACACACACACACACACACACACACACACACAC472220.45272802140252494No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG235780.22604763221864246No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT223110.21390061593138232No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA213810.20498449505754493No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)