FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006414981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006414981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10430545
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG503250.4824771859955544No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACAC471260.45180764763490305No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT286980.2751342331584783No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG252150.24174192240194545No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA112510.10786588811994005No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)