FastQCFastQC Report
Mon 8 Aug 2022
EGAF00006415022

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006415022
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54098754
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA3182450.5882667833717575No Hit
ACACACACACACACACACACACACACACACACACACACACACACACACAC3056170.5649242864262641No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT2301150.4253609981479426No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG1999230.369551949385008No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)