FastQCFastQC Report
Sat 6 Aug 2022
EGAF00006415044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006415044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences419281
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACACACACACACACACACACACACACACACACACACACACACACACAC12280.292882339051853No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT9160.21846923662174056No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG8540.20368201754909No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA7570.18054717480639476No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)