Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00006419078 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 91770632 |
Total Bases | 11.4 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 8743842 | 9.527930460367758 | TruSeq Adapter, Index 1 (100% over 50bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGAGCTCGTATGC | 197246 | 0.214933683795487 | TruSeq Adapter, Index 1 (98% over 50bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGACCTCGTATGC | 123259 | 0.13431203132610006 | TruSeq Adapter, Index 1 (98% over 50bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGAACTCGTATGC | 120329 | 0.13111928879382678 | TruSeq Adapter, Index 1 (98% over 50bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC | 105592 | 0.11506077456238942 | TruSeq Adapter, Index 1 (98% over 50bp) |