Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00006419090 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 90922881 |
Total Bases | 11.3 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 8745147 | 9.618202705213443 | TruSeq Adapter, Index 1 (100% over 50bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGAGCTCGTATGC | 198849 | 0.21870072506831365 | TruSeq Adapter, Index 1 (98% over 50bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGAACTCGTATGC | 126750 | 0.1394038536900299 | TruSeq Adapter, Index 1 (98% over 50bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGACCTCGTATGC | 125907 | 0.13847669433176013 | TruSeq Adapter, Index 1 (98% over 50bp) |